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Ghasemian M, Layton C, Nampe D, zur Nieden NI, Tsutsui H, and Princevac M. Hydrodynamic characterization within a spinner flask and a rotary wall vessel for stem cell culture. Biochemical Engineering Journal 2020;157:107533. https://doi.org/10.1016/j.bej.2020.107533


Rutherford D, Exarhos S, Xu C, Niacaris M, Mariano C, Dayap B, Mangolini L, and Liu H. Synthesis, characterization, and cytocompatibility of yttria stabilized zirconia nanopowders for creating a window to the brain. Journal of Biomedical Materials Research Part B: Applied Biomaterials 2020;108:925–38. https://doi.org/10.1002/jbm.b.34445


Leung AW, Broton C, Bogacheva MS, Xiao AZ, Garcia-Castro MI, and Lou YR. RNA-based CRISPR-Mediated Loss-of-Function Mutagenesis in Human Pluripotent Stem Cells. Journal of Molecular Biology Published Online First: 25 April 2020. https://doi.org/10.1016/j.jmb.2020.04.017


Prasad MS, Uribe-Querol E, Marquez J, Vadasz S, Yardley N, Shelar PB, Charney RM, and Garcia-Castro MI. Blastula stage specification of avian neural crest. Developmental Biology 2020;458:64–74. https://doi.org/10.1016/j.ydbio.2019.10.007


Marquez J, Criscione J, Charney RM, Prasad MS, Hwang WY, Mis EK, García-Castro MI, Khokha MK. Disrupted ER membrane protein complex-mediated topogenesis drives congenital neural crest defects. J Clin Invest. 2020 Jan 6. https://www.jci.org/articles/view/129308


Zheng, Sika. Alternative splicing programming of axon formation. WIREs RNA. Jan 2020; e1585. https://doi.org/10.1002/wrna.1585



Davis, B, Vivian To, and PrueTalbot (2019) Comparison of cytotoxicity of IQOS aerosols to smoke from Marlboro Red and 3R4F reference cigarettes. Toxicology In Vitro Vol 61, December 2019, 104652. https://doi.org/10.1016/j.tiv.2019.104652


Christopher B. Horner, Maricela Maldonado, Youyi Tai, R. M. Imtiaz Karim Rony, and Jin Nam. Spatially Regulated Multiphenotypic Differentiation of Stem Cells in 3D via Engineered Mechanical Gradient. ACS Applied Materials & Interfaces 2019 11 (49), 45479-45488. https://pubs.acs.org/doi/10.1021/acsami.9b17266


Prasad MS, Uribe-Querol E, Marquez J, Vadasz S, Yardley N, Shelar PB, Charney RM, García-Castro MI. Blastula stage specification of avian neural crest. Dev Biol. 2019 Oct 11; https://www.sciencedirect.com/science/article/pii/S0012160619303574


Gomez GA, Prasad MS, Wong M, Charney RM, Shelar PB, Sandhu N, Hackland JOS, Hernandez JC, Leung AW, García-Castro MI. WNT/β-catenin modulates the axial identity of embryonic stem cell-derived human neural crest. Development. 2019 Aug 29;146(16). doi: 10.1242/dev.175604.


Hackland JOS, Shelar PB, Sandhu N, Prasad MS, Charney RM, Gomez GA, Frith TJR, García- Castro MI. FGF Modulates the Axial Identity of Trunk hPSC-Derived Neural Crest but Not the Cranial-Trunk Decision. Stem Cell Reports. 2019 May 14;12(5):920-933. doi: 10.1016/j.stemcr.2019.04.015.


Gang Guo, Xiang Zhuang, Qing Xu, Zhenru Wu, Yongjie Zhu, Yongjie Zhou, Yuanmin Li, Yanrong Lu, Bo Zhang, Prue Talbot, Jiayu Liao, Junjun She, Hong Bu & Yujun Shi. Peripheral infusion of human umbilical cord mesenchymal stem cells rescues acute liver failure lethality in monkeys. Stem Cell Res Ther 10, 84 (2019). https://doi.org/10.1186/s13287-019- 1184-2.


Gustavo A. Gomez, Maneeshi S. Prasad, Nabjot Sandhu, Patrick B. Shelar, Alan W. Leung and Martín I. García-Castro. Human neural crest induction by temporal modulation of WNT activation.  (2019), Developmental Biology. 449: 99-106. https://www.sciencedirect.com/science/article/pii/S0012160618304548


Maria A. Surmeneva, Anna A. Ivanova, Qiaomu Tian, Rebekah Pittman, Wensen Jiang, Jiajia Lin, Huinan H. Liu, Roman A. Surmenev. Bone marrow derived mesenchymal stem cell response to the RF magnetron sputter deposited hydroxyapatite coating on AZ91 magnesium alloy. (2019), Materials Chemistry and Physics, 221: 89-98. https://www.sciencedirect.com/science/article/abs/pii/S0254058418307818


Rutherford, D,  Exarhos, S,  Xu, C, et al.  Synthesis, characterization, and cytocompatibility of yttria stabilized zirconia nanopowders for creating a window to the brain. J Biomed Mater Res.  2020; 108B: 925– 938. https://doi.org/10.1002/jbm.b.34445


Video-based kinetic analysis of calcification in live osteogenic human embryonic stem cell cultures reveals the developmentally toxic effect of Snus tobacco extract. Ivann K.C. Martinez, Nicole R.L. Sparks, Joseph V. Madrid, Henry Affeldt, Madeline K.M. Vera, Bir Bhanu, Nicole I. zur Nieden, (2019), Toxicology and Applied Pharmacology, 363:111-121. https://pubmed.ncbi.nlm.nih.gov/30468815/


A Mitochondrial Stress Response in Neural Stem Cells Exposed to Electronic Cigarettes. Atena Zahedi, Rattapol Phandthong, Angela Chaili, Guadalupe Remark and Prue Talbot (2019), iScience, Vol 16, P250-269. https://doi.org/10.1016/j.isci.2019.05.034


Fabrication of centimeter-scale and geometrically arbitrary vascular networks using in vitro self-assembly. Morgan, J.T., Shirazi, J., Comber, E.M., Eschenburg, C., Gleghorn, J.P. (2019) Biomaterials, Volume 189, 2019, Pages 37-47. https://www.sciencedirect.com/science/article/pii/S014296121830735X



Developmental Xist induction is mediated by enhanced splicing. Stork, C., Li, Z., Lin, L., Zheng, S. Nucleic Acids Res. 2018 Nov 29.  doi: 10.1093/nar/gky1198.


Early specification and development of rabbit neural crest cells. Betters, E., Charney, R.M., Garcia-Castro, M.I., Developmental Biology, 2018 https://doi.org/10.1016/j.ydbio.2018.06.012


Dynamic blebbing: A bottleneck to human embryonic stem cell culture that can be overcome by laminin-Integrin signaling. Weng, N.J.H., Cheung, C., Talbot, P. (2018) Stem Cell Research, Volume 33, Pages 233-246. https://www.sciencedirect.com/science/article/pii/S1873506118302678


The Mechanosensitive Ion Channel TRPV4 is a Regulator of Lung Development and Pulmonary Vasculature Stabilization. Morgan, J.T., Stewart, W.G., McKee, R.A., Gleghorn, J.P., (2018) Cel. Mol. Bioeng.11: 309. https://link.springer.com/article/10.1007/s12195-018-0538-7


Epithelial-to-Mesenchymal Transition of A549 Lung Cancer Cells Exposed to Electronic Cigarettes.
Zahedi, A., Phandthong, R., Chaili, A., Lemark, G. & Talbot, P. Lung Cancer 122, 224–233 (2018). https://pubmed.ncbi.nlm.nih.gov/30032837/


Deep Analysis of Mitochondria and Cell Health Using Machine Learning.
Zahedi, A., On. V., Phandthong, R., Chaili, A., Remark, G., Bhanu, B., Talbot, P. Scientific Reports. 2018 Nov 5; 8(1):16354. https://www.nature.com/articles/s41598-018-34455-y



Low, K., Wong, L. Y., Maldonado, M., Manjunath, C., Horner, C. B., Perez, M., … Nam, J. (2017). Physico-electrochemical Characterization of Pluripotent Stem Cells during Self-Renewal or Differentiation by a Multi-modal Monitoring System. Stem Cell Reports8(5), 1329–1339. https://doi.org/10.1016/j.stemcr.2017.03.021

Maldonado, M., Luu, R. J., Ico, G., Ospina, A., Myung, D., Shih, H. P., & Nam, J. (2017). Lineage- and developmental stage-specific mechanomodulation of induced pluripotent stem cell differentiation. Stem Cell Research & Therapy8(1), 216.http://doi.org/10.1186/s13287-017-0667-2

Nampe, D., Joshi, R., Keller, K., zur Nieden, N. I., & Tsutsui, H. (2017). Impact of fluidic agitation on human pluripotent stem cells in stirred suspension culture. Biotechnology and Bioengineering114(9), 2109–2120. http://doi.org/10.1002/bit.26334

Sparks, N. R. L., Martinez, I. K. C., Soto, C. H., & zur Nieden, N. I. (2017). Low Osteogenic Yield in Human Pluripotent Stem Cells Associates with Differential Neural Crest Promoter Methylation. Stem Cells36(3), 349–362. http://doi.org/10.1002/stem.2746

Weng, N. J.-H., & Talbot, P. (2017). The P2X7 receptor is an upstream regulator of dynamic blebbing and a pluripotency marker in human embryonic stem cells. Stem Cell Research23, 39–49. https://doi.org/10.1016/j.scr.2017.06.007



Maricela Maldonado, Lauren Y. Wong, Cristina Echeverria, Gerardo Ico, Karen Low, Taylor Fujimoto, Jed K. Johnson, Jin Nam. The effect of electrospun substrate-mediated cell colony morphology on the self-renewal of human induced pluripotent stennm cells.Biomaterials 50 (2015) 10-19

Cipriano AF, Sallee A, Guan RG, Zhao ZY, Tayoba M, Sanchez J, Liu H.Investigation of magnesium-zinc-calcium alloys and bone stem cell response in direct culture.Acta Biomater. 2015 Jan 15;12:298-321



Yang X, Scott HA, Ardekani S, Williams M, Talbot P, Ghosh K. Aberrant cell and basement membrane architecture contribute to sidestream smoke-induced choroidal endothelial dysfunction. Invest Ophthalmol Vis Sci. Apr 8;55(5):3140-7

Keller KC, Rodrigues B, zur Nieden NI. Suspension culture of pluripotent stem cells: effect of shear on stem cell fate. Crit Rev Eukaryot Gene Expr. 24(1):1-13

McClelland Descalzo DL, Ehnes DD, zur Nieden NI. Stem cells for osteodegenerative diseases: current studies and future outlook.Regen Med. Mar;9(2):219-30

Guan, B. X., B. Bhanu, P. Talbot, S. Lin. Bio-driven cell region detection in human embryonic stem cell assay. IEEE/ACM Transactions on Computational Biology and Bioinformatics, Jan 2014; 11(3):604-611

Lin, S.C., Talbot, P. Stem Cells. In: Wexler, P. (Ed.), Encyclopedia of Toxicology, 3rd edition vol 4. Elsevier Inc., Academic Press, pp. 390–394

Talbot, P. N. zur Nieden, S. Lin, I. Martinez, B. Guan and B. Bhanu. Use of video bioinformatics tools in stem cell biology. In: Handbook of Nanotoxicology, Nanomedicine and Stem Cell Use in Toxicology, Eds: S. Sahu and D. Casciano, John Wiley, West Sussex, United Kingdom. p 379-402

Sebaa M, Nguyen TY, Dhillon S, Garcia S, Liu H. The effect of poly (3, 4-ethylenedioxythiophene) (PEDOT) coating on magnesium degradation and cytocompatibility with hESCs for potential neural applications. J Biomed Mater Res A. Feb 23

Cipriano AF, De Howitt N, Gott SC, Miller C, Rao MP, Liu HBone Marrow stromal cell adhesion and morphology on micro-and sub-micropatterned titanium. J Biomed Nanotechnol Apr 10(4):660-8



Daniel Nampe and Hideaki Tsutsui. Engineered micromechanical cues affecting human pluripotent stem cell regulations and Fate.Journal of laboratory Automation (JALA)

Aaron F. Cipriano et al. In vitro degradation of four magnesium–zinc–strontium alloys and their cytocompatibility with human embryonic stem cells. J Mater Sci: Mater Med 24:989–1003

Thanh Yen Nguyen et alAn in vitro mechanism study on the proliferation and pluripotency of human embryonic stems cells in response to magnesium degradation. PLOS One, Vol8, Issue 10



Nicole zur Nieden et al. Embryonic stem cell test: stem cell use in predicting developmental cardiotoxicity and osteotoxicity.Methods in Molecular Biology, Volume 889, 2012, pp 147-179

Rachel Z. Behar,  et al. Adaptation of stem cells to 96-well plate assays: use of human embryonic and mouse neural stem cells in the MTT Assay. Current Protocols in Stem Cell Biology 1C.13.1-1C.13.21, Suppl 23

Jaclyn Lock et al. Nanophase hydroxyapatite and poly(lactide-co-glycolide) composites promote human mesenchymal stem cell adhesion and osteogenic differentiation in vitro. J Mater Sci: Mater Med 23:2543–2552

Vasundhra Bahla et al. Comparison of electronic cigarette refill fluid cytotoxicity using embryonic and adult models. Reproductive Toxicology 34 p.529– 537

R. Z. Behar et al. A method for rapid dose–response screening of environmental chemicals using human embryonic stem cells.Journal of Pharmacological and Toxicological Methods.

Huawen Ding et al. NO–b-catenin crosstalk modulates primitive streak formation prior to embryonic stem cell osteogenic differentiation. Journal of Cell Science 125, 5564–5577

Laughing Bear Torrez et al. Derivation of Neural Progenitors and Retinal Pigment Epithelium from CommonMarmoset and Human Pluripotent Stem Cells.Stem Cells International, Vol. 2012



Sarbrina Lin  and  Prue Talbot P. Methods for culturing mouse and human embryonic stem cells. Methods Mol Biol. 690:31-56

Prue Talbot and Sabrina Lin.Mouse and human embryonic stem cells: can they improve human health by preventing disease? Curr Top Med Chem. 11(13):1638-52

Prue Talbot and Sabrina Lin. The effect of cigarette smoke on fertilization and pre-implantation development: assessment using animal models, clinical data, and stem cells. Biol Res. 44(2):189-94



Lin S et al. Video bioinformatics analysis of human embryonic stem cell colony growth. J Vis Exp. May 20;(39)

Lin S et al. Comparison of the toxicity of smoke from conventional and harm reduction cigarettes using human embryonic stem cells.Toxicol Sci. Nov;118(1):202-12



Jiaxi Zhou et al. mTOR supports long-term self-renewal and supressess mesoderm and endoderm activities of human embryonic stem cells. PNAS

Lluis Quintana et al. Morphogenetic and regulatory mechanisms during developmental chondrogenesis: new paradigms for cartilage tissue engineering. Tissue Engineering: Part B, vol 15, No1




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